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研究成果番号 情報
7

"Crystal Structure of the Calcium Pump of Sarcoplasmic Reticulum at 2.6 Å Resolution"

Toyoshima Chikashi

Nature, 405, (2000) 647-655

9

"Role of Amino Acid Residues at Turns in the Conformational Stability and Folding of Human Lysozyme"

Takano Kazufumi

Biochemistry, 39, (2000) 8655-8665

22

"How a Protein Generates a Catalytic Radical from Coenzyme B12: X-Ray Structure of a Diol-Dehydrataze-Adeninylpentylcobalamin Complex"

Masuda Jun

Structure, 8, (2000) 775-788

33

"Three-Dimensional Structure of the Purple Intermediate of Porcine Kidney D-Amino Acid Oxidase. Optimization of the Oxidative Half-Reaction through Alignment of the Product with Reduced Flavin"

Mizutani Hisashi

The Journal of Biochemistry, 128, (2000) 73-81

57

"Crystallization and the Crystal Properties of the Oxygen-Evolving Photosystem II from Synechococcus vulcanus"

Shen Jian-Ren

Biochemistry, 39, (2000) 14739-14744

58

"Structural Basis for Double-Sieve Discrimination of L-Valine from L-Isoleucine and L-Threonine by the Complex of tRNAVal and Valyl-tRNA Synthetase"

Fukai Shuya

Cell, 103, (2000) 793-803

78

"Studies on the Hydrolyzing Mechanism for Cyclodextrins of Thermoactinomyces Vulgaris R-47 α-Amylase 2(TVAII). X-Ray Structure of the Mutant E354A Complexed with β-Cyclodextrin, and Kinetic Analyses on Cyclodextrins"

Kondo Shin

The Journal of Biochemistry, 129, (2001) 423-428

91

"Crystallization of the F41 Fragment of Flagellin and Data Collection from Extremely Thin Crystals"

Samatey Fadel A.

Journal of Structural Biology, 132, (2000) 106-111

96

"Structure of the Electron Transfer Complex between Ferredoxin and Ferredoxin-NADP+ Reductase"

Kurisu Genji

Nature Structural Biology, 8, (2001) 117-121

98

"Purification, Crystallization and Preliminary X-Ray Diffraction Analysis of the Fructose-1,6-/Sedoheptulose-1,7-Bisphosphatase of Synechococcus PCC 7942"

Nakamura Yoshihiro

Acta Crystallographica Section D, 57, (2001) 454-456

193

"Crystallization and Improvement of Crystal Quality for X-Ray Diffraction of Maltooligosyl Trehalose Synthase by Reductive Methylation of Lysine Residues"

Kobayashi Masanori

Acta Crystallographica Section D, 55, (1999) 931-933

195

"Removal of the Bridging Ligand Atom at the Ni-Fe Active Site of [NiFe] Hydrogenase upon Reduction with H2, as Revealed by X-Ray Structure Analysis at 1.4Å Resolution"

Higuchi Yoshiki

Structure, 7, (1999) 549-556

196

"Contribution of Hydrogen Bonds to the Conformational Stability of Human Lysozyme: Calorimetry and X-Ray Analysis of Six Ser → Ala Mutants"

Takano Kazufumi

Biochemistry, 38, (1999) 6623-6629

198

"Crystal Structure of a Prokaryotic Replication Initiator Protein Bound to DNA at 2.6 Å Resolution"

Komori Hirofumi

The EMBO Journal, 18, (1999) 4597-4607

199

"Experimental Verification of the 'Stability Profile of Mutant Protein' (SPMP) Data Using Mutant Human Lysozymes"

Takano Kazufumi

Protein Engineering, 12, (1999) 663-672

201

"Crystal Structure of Thermus thermophilus HB8 UvrB Protein, a Key Enzyme of Nucleotide Excision Repair"

Nakagawa Noriko

The Journal of Biochemistry, 126, (1999) 986-990

202

"Atomic Structure of the GCSF-Receptor Complex Showing a New Cytokine-Receptor Recognition Scheme"

Aritomi Masaharu

Nature, 401, (1999) 713-717

203

"Effect of Foreign N-Terminal Residues on the Conformational Stability of Human Lysozyme"

Takano Kazufumi

European Journal of Biochemistry, 266, (1999) 675-682

204

"Structural Basis for the Higher Ca2+-Activation of the Regulated Actin-Activated Myosin ATPase Observed with Dictyostelium/Tetrahymena Actin Chimeras"

Matsuura Yoshiyuki

Journal of Molecular Biology, 296, (2000) 579-595

221

"Ribosomal Protein L5 has a Highly Twisted Concave Surface and Flexible Arms Responsible for rRNA Binding"

Nakashima Takashi

RNA, 7, (2001) 692-701

223

"Crystal Structures of Photosynthetic Reaction Center and High-Potential Iron-Sulfur Protein from Thermochromatium tepidum: Thermostability and Electron Transfer"

Nogi Terukazu

Proceedings of the National Academy of Sciences of the United States of America, 97, (2000) 13561-13566

231

"Crystal Structure of Rat Heme Oxygenase-I in Complex with Heme"

Sugishima Masakazu

FEBS Letters, 471, (2000) 61-66

293

"A New Mode of B12 Binding and the Direct Participation of a Potassium Ion in Enzyme Catalysis: X-Ray Structure of Diol Dehydratase"

Shibata Naoki

Structure, 7, (1999) 997-1008

294

"X-Ray Crystallography of Mutant Actins Which Affect Calcium Regulation of Muscle Contraction"

Matsuura Yoshiyuki

Doctor Thesis (The University of Tokyo), , (2000)

566

"Enzyme Structure with Two Catalytic Sites for Double-Sieve Selection of Substrate"

Nureki Osamu

Science, 280, (1998) 578-582

582

"Proofreading by Isoleucyl-Transfer RNA Synthetase: Response"

Nureki Osamu

Science, 283, (1999) 459

607

"Structural Basis for Recognition of the Tra mRNA Precursor by the Sex-Lethal Protein"

Handa Noriko

Nature, 398, (1999) 579-585

766

"First Results from the Bio-Crystallography Beamline at SPring-8"

Kamiya Nobuo

RIKEN Review, 18, (1998) 29-30

828

"Crystal Structure of the Holliday Junction DNA in Complex with a Single RuvA Tetramer"

Ariyoshi Mariko

Proceedings of the National Academy of Sciences of the United States of America, 97, (2000) 8257-8262

830

"Structural and Functional Studies of MinD ATPase: Implications for the Molecular Recognition of the Bacterial Cell Division Apparatus"

Hayashi Ikuko

The EMBO Journal, 20, (2001) 1819-1828

841

"Crystallization and Preliminary Crystallographic Studies of RhoGDI in Complex with the Radixin FERM Domain"

Hamada Keisuke

Acta Crystallographica Section D, 57, (2001) 889-890

842

"1.9Å X-Ray Study Shows Closed Flap Conformation in Crystals of Tethered HIV-1 PR"

Pillai Bindu

Proteins: Structure, Function, and Genetics, 43, (2001) 57-64

917

"Crystal Structure of a Novel-Type Archaeal Rubisco with Pentagonal Symmetry"

Kitano Ken

Structure, 9, (2001) 473-481

1196

"New Crystal Forms and Low Resolution Structure Analysis of 20S Proteasomes from Bovine Liver"

Tomisugi Yoshikazu

The Journal of Biochemistry, 127, (2000) 941-943

1423

"Crystal Structure of Escherichia coli Fdx, an Adrenodoxin-Type Ferredoxin Involved in the Assembly of Iron-Sulfur Clusters"

Kakuta Yoshimitsu

Biochemistry, 40, (2001) 11007-11012

1506

"Role of Non-Glycine Pesidues in Left-Handed Helical Conformation for the Conformational Stability of Human Lysozyme"

Takano Kazufumi

Proteins: Structure, Function, and Genetics, 44, (2001) 233-243

1571

"The Three-Dimensional Structure of Septum Site-Determining Protein MinD from Pyrococcus horikoshii OT3 in Complex with Mg-ADP"

Sakai Naoki

Structure, 9, (2001) 817-826

1742

"The Bio-Crystallography Beamline (BL41XU) at SPring-8"

Kawamoto Masahide

Nuclear Instruments and Methods in Physics Research Section A, 467-468, (2001) 1375-1379

1751

"Large-Scale Networks of Hydration Water Molecules Around Proteins Investigated by Cryogenic X-Ray Crystallography"

Nakasako Masayoshi

Cellular and Molecular Biology, 47, (2001) 767-790

1779

"The Adoption of a Twisted Structure of Importin-β is Essential for the Protein-Protein Interaction Required for Nuclear Transport"

Lee Soo Jae

Journal of Molecular Biology, 302, (2000) 251-264

1790

"Crystallization and Preliminary X-Ray Diffraction Studies of Monomeric Isocitrate Dehydrogenase by the MAD Method Using Mn Atoms"

Yasutake Yoshiaki

Acta Crystallographica Section D, 57, (2001) 1682-1685

1801

"Crystallization and Preliminary X-Ray Diffraction Studies of Catalase-Peroxidase from Synechococcus PCC 7942"

Wada Kei

Acta Crystallographica Section D, 58, (2002) 157-159

1814

"Crystallization of Scytalone Dehydratase F162A Mutant in the Unligated State and a Preliminary X-Ray Diffraction Study at 37 K"

Motoyama Takayuki

Acta Crystallographica Section D, 58, (2002) 148-150

1912

"An Open-Flow Cryostat Using Helium Gas for Cryogenic X-Ray Diffraction Experiments"

Nakasako Masayoshi

Review of Scientific Instruments, 73, (2002) 1318-1320

1956

"The Crystal Structure of Human MRP14 (S100A9), a Ca2+-Dependent Regulator Protein in Inflammatory Process"

Itou Hiroshi

Journal of Molecular Biology, 316, (2002) 265-276

1959

"Crystal Structure of 1-Deoxy-D-Xylulose 5-Phosphate Reductoisomerase Complexed with Cofactors: Implications of a Flexible loop Movement Upon Substrate Binding"

Yajima Shunsuke

The Journal of Biochemistry, 131, (2002) 313-317

2006

"Atomic Resolution Structures of Oxidized [4Fe-4S] Ferredoxin from Bacillus thermoproteolyticus in Two Crystal Forms: Systematic Distortion of [4Fe-4S] Cluster in the Protein"

Fukuyama Keiichi

Journal of Molecular Biology, 315, (2002) 1155-1166

2007

"The Crystal Structure of Exonuclease RecJ Bound to Mn2+ Ion Suggests How Its Characteristic Motifs are Involved in Exonuclease Activity"

Yamagata Atsushi

Proceedings of the National Academy of Sciences of the United States of America, 99, (2002) 5908-5912

2042

"Functional Role of Internal Water Molecules in Rhodopsin Revealed by X-Ray Crystallography"

Okada Tetsuji

Proceedings of the National Academy of Sciences of the United States of America, 99, (2002) 5982-5987

2137

"The Structure of the Mammalian 20S Proteasome at 2.75 Å Resolution"

Unno Masaki

Structure, 10, (2002) 609-618

2178

"Crystal Structure of the Stimulatory Complex of GTP Cyclohydrolase I and Its Feedback Regulatory Protein GFRP"

Maita Nobuo

Proceedings of the National Academy of Sciences of the United States of America, 99, (2002) 1212-1217

2185

"Structural Basis for Neurofibromatosis Type 2 Crystal Structure of the Merlin Ferm Domain"

Shimizu Toshiyuki

The Journal of Biological Chemistry, 277, (2002) 10332-10336

2207

"Crystallization of the Functional Domain of Human Thrombopoietin Using an Antigen-Binding Fragment Derived from Neutralizing Monoclonal Antibody"

Kuroki Ryota

Acta Crystallographica Section D, 58, (2002) 856-858

2279

"Three-Dimensional Structure of the Flavoenzyme Acyl-CoA Oxidase-II from Rat Liver, the Peroxisomal Counterpart of Mitochondrial Acyl-CoA Dehydrogenase"

Nakajima Yoshitaka

The Journal of Biochemistry, 131, (2002) 365-374

2498

"Crystal Structure of Rat Apo-Heme Oxygenase-1 (HO-1): Mechanism of Heme Binding in HO-1 Inferred from Structural Comparison of the Apo and Heme Complex Forms"

Sugishima Masakazu

Biochemistry, 41, (2002) 7293-7300

2922

"Crystallization and Preliminary X-Ray Analysis of a DNA Primase from Hyperthermophilic Archaeon Pyrococcus horikoshii"

Ito Nobutoshi

The Journal of Biochemistry, 130, (2001) 727-730

3000

"Structural Analyses of DNA Recognition by the AML1/Runx-1 Runt Domain and Its Allosteric Control by CBFβ"

Tahirov Tahir H.

Cell, 104, (2001) 755-767

3045

"Fundamental Design of the High Energy Undulator Pilot Beamline for Macromolecular Crystallography at the SPring-8"

Kamiya Nobuo

Review of Scientific Instruments, 66, (1995) 1703-1705

3218

"The Crystal Structure of N1-[2-(2-amino-ethylamino)-ethyl]-ethane-1,2-diamine (polyamines) Binding to the Minor Groove of d(CGCGCG)2, Hexamer at Room Temperature"

Ohishi Hirofumi

FEBS Letters, 523, (2002) 29-34

3271

"Crystal Structure of Oxygen-Evolving Photosystem II from Thermosynechococcus vulcanus at 3.7-Å Resolution"

Kamiya Nobuo

Proceedings of the National Academy of Sciences of the United States of America, 100, (2003) 98-103

3355

"Crystal Structure of the Complex of Human Epidermal Growth Factor and Receptor Extracellular Domains"

Ogiso Hideo

Cell, 110, (2002) 775-787

3356

"Crystallization and Preliminary X-Ray Analysis of the Archaeosine tRNA-Guanine Transglylase from Pyrococcus horikoshii"

Ishitani Ryuichiro

Acta Crystallographica Section D, 57, (2001) 1659-1662

3357

"An Enzyme with a Deep Trefoil Knot for the Active-Site Architecture"

Nureki Osamu

Acta Crystallographica Section D, 58, (2002) 1129-1137

3358

"Crystal Structure of Archaeosine tRNA-Guanine Transglycosylase"

Ishitani Ryoichiro

Journal of Molecular Biology, 318, (2002) 665-677

3359

"Functional Convergence of Two Lysyl -tRNA Synthetases with Unrelated Topologies"

Terada Takaho

Nature Structural Biology, 9, (2002) 257-262

3360

"Gene Cloning, Expression, Crystallization and Preliminary X-Ray Analysis of Thermus thermophilus Arginyl-tRNA Synthetase"

Shimada Atsushi

Acta Crystallographica Section D, 57, (2001) 272-275

3361

"Structural and Mutational Studies of the Recognition of the Arginine tRNA-Specific Major Identity Element, A20, by Arginyl-tRNA Synthetase"

Shimada Atsushi

Proceedings of the National Academy of Sciences of the United States of America, 98, (2001) 13537-13542

3378

"Structure of the Monomeric Isocitrate Dehydrogenase: Evidence of a Protein Monomerization by a Domain Duplication"

Yasutake Yoshiaki

Structure, 10, (2002) 1637-1648

3443

"Substrate-Induced Conformational Change of a Coenzyme B12-Dependent Enzyme: Crystal Structure of the Substrate-Free Form of Diol Dehydratase"

Shibata Naoki

Biochemistry, 41, (2002) 12607-12617

3611

"Crystal Structure of Rat Heme Oxygenase-1 in Complex with Heme Bound to Azide: Implication for Regiospecific Hydroxylation of Heme atα-Meso Carbon"

Sugishima Masakazu

The Journal of Biological Chemistry, 277, (2002) 45086-45090

3663

"Crystal Structure of Hyperthermophilic Archaeal Initiation Factor 5A: A Homologue of Eukaryotic Initiation Factor 5A (eIF-5A)"

Yao Min

The Journal of Biochemistry, 133, (2003) 75-81

3668

"Crystallization and Preliminary X-Ray Crystallographic Studies of Salt-Tolerant Glutaminase from Micrococcus luteus K-3"

Chantawannakul Panuwan

Acta Crystallographica Section D, 59, (2003) 566-568

3891

"ATP Binding by Glutamyl-tRNA Synthetase is Switched to the Productive Mode by tRNA Binding"

Sekine Shun-ichi

The EMBO Journal, 22, (2003) 676-688

3893

"Mechanism of Metal Activation of Human Hematopoietic Prostaglandin D Synthase"

Inoue Tsuyoshi

Nature Structural Biology, 10, (2003) 291-296

3927

"Crystal Structure of the BAFF-BAFF-R Complex and Its Implications for Receptor Activation"

Kim Homin

Nature Structural Biology, 10, (2003) 342-348

3954

"Specific Damage Induced by X-Ray Radiation and Structural Changes in the Primary Photoreaction of Bacteriorhodopsin"

Matsui Yasuhiro

Journal of Molecular Biology, 324, (2002) 469-481

3985

"Structural Basis of Adhesion-Molecule Recognition by ERM Proteins Revealed by the Crystal Structure of the Radixin/ICAM-2 Complex"

Hamada Keisuke

The EMBO Journal, 22, (2003) 502-514

3988

"Crystallographic Characterization of the Radixin FERM Domain Bound to the C-Terminal Region of the Human Na+/H+ -Exchanger Regulatory Factor (NHERF)"

Terawaki Shin-ichi

Acta Crystallographica Section D, 59, (2003) 177-179

4550

"Crystal Structure of the Yeast Cytosine Deaminase. Insights into the Enzyme Mechanism and Evolution"

Ko Tzu-Ping

The Journal of Biological Chemistry, 278, (2003) 19111-19117

4554

"Crystallization and Preliminary Crystallographic Analysis of Yeast Cytosine Deaminase"

Hsu Cheng-Sheng

Acta Crystallographica Section D, 59, (2003) 950-952

4555

"Crystal Structure of D-Aminoacylase from Alcaligenes Faecalis DA1. A Novel Subset of Amidohydrolases and Insights into the Enzyme Mechanism"

Liaw Shwu-Huey

The Journal of Physical Chemistry B, 278, (2003) 4957-4962

4751

"Structural Studies of the Carbon Monoxide Complex of [NiFe]Hydrogenase from Desulfovibrio Vulgaris Miyazaki F:Suggestion for the Initial Activation Site for Dehydrogen"

Ogata Hideaki

Journal of the American Chemical Society, 124, (2002) 11628-11635

4857

"Crystal Structure of Rice α-galactosidase Complexed with D-Galactose"

Fujimoto Zui

The Journal of Biological Chemistry, 278, (2003) 20313-20318

4926

"Crystallization and Preliminary X-Ray Characterization of Archaeal Group II Chaperonin α-Subunit from Thermococcus Strain KS-1"

Shomura Yasuhito

Acta Crystallographica Section D, 58, (2002) 1830-1832

5027

"Structural Rationalization for the Lack of Stereospecificity in Coenzyme B12-Dependent Diol Dehydratase"

Shibata Naoki

The Journal of Biological Chemistry, 278, (2003) 22717-22725

5043

"Crystal Structures of the Quinone Oxidoreductase from Thermus thermophilus HB8 and Its Complex with NADPH: Implication for NADPH and Substrate Recognition"

Shimomura Yoshimitsu

Journal of Bacteriology, 185, (2003) 4211-4218

5076

"Preparation and Crystallization of Human Flap Endonuclease FEN-1 in Complex with Proliferating-Cell Nuclear Antigen, PCNA"

Sakurai Shigeru

Acta Crystallographica Section D, 59, (2003) 933-935

5118

"Structural Basis for Orthogonal tRNA Specificities of Tyrosyl-tRNA Synthetases for Genetic Code Expansion"

Kobayashi Takatsugu

Nature Structural Biology, 10, (2003) 425-432

5126

"Alternative Tertiary Structure of tRNA for Recognition by a Posttranscriptional Modification Enzyme"

Ishitani Ryuichiro

Cell, 113, (2003) 383-394

5127

"Mechanism of Molecular Interactions for tRNAVal Recognition by valyl-tRNA Synthetase"

Fukai Shuya

RNA, 9, (2003) 100-111

5144

"Crystal Structure of Enterococcus hirae Enolase at 2.8 Å Resolution"

Hosaka Toshiaki

The Journal of Biochemistry, 133, (2003) 817-823

5163

"Crystal Structures of Ferrous and CO-, CN--, and NO-Bound Forms of Rat Heme Oxygenase-1 (HO-1) in Complex with Heme: Structural Implications for Discrimination between CO and O2 in HO-1"

Sugishima Masakazu

Biochemistry, 42, (2003) 9898-9905

5175

"Structure of the Core Domain of Human Cardiac Troponin in the Ca2+-Saturated Form"

Takeda Soichi

Nature, 424, (2003) 35-41

5215

"Crystallization and Preliminary X-ray Diffraction Studies of C4-form Phosphoenolpyruvate Carboxylase from Maize"

Matsumura Hiroyoshi

Acta Crystallographica Section D, 55, (1999) 1937-1938

5216

"Crystal Structure of C4 Form Maize and Quaternary Complex of E.coli Phosphoenolpyruvate Carboxylases"

Matsumura Hiroyoshi

Structure, 10, (2002) 1721-1730

5266

"Creation of Soybean β-Conglycinin β with Strong Phagocytosis-Stimulating Activity"

Maruyama Nobuyuki

Biochimica et Biophysica Acta - Proteins and Proteomics, 1648, (2003) 99-104

5276

"Crystallization and Preliminary X-Ray Analysis of a Novel Unsaturated Glucuronyl Hydrolase from Bacillus sp. GL1"

Mori Shigetarou

Acta Crystallographica Section D, 59, (2003) 946-949

5280

"Crystallization and Preliminary X-Ray Analysis of Alginate Lyase, a Member of Family PL-7, from Pseudomonas aeruginosa"

Yamasaki Masayuki

Acta Crystallographica Section D, 59, (2003) 1499-1501

5304

"Crystal Structure of Rat Heme Oxygenase-1 in Complex with Biliverdin-Iron Chelate: Conformational Change of the Distal Helix during the Heme Cleavage Reaction"

Sugishima Masakazu

The Journal of Biological Chemistry, 278, (2003) 32352-32358

5360

"Crystal Structure of the Monomeric Isocitrate Dehydrogenase in the Presence of NADP+: Insight into the Cofactor Recognition, Catalysis, and Evolution"

Yasutake Yoshiaki

The Journal of Biological Chemistry, 278, (2003) 36897-36904